Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 MYC-209ENST00000641252 345 ntBASIC14.72□□□□□ -0.05
UPK1BO75841 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
UPK1BO75841 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1BO75841 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 CICP23-201ENST00000605013 2741 ntBASIC14.72□□□□□ -0.05
UPK1BO75841 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1BO75841 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1BO75841 AC126755.1-201ENST00000525846 6405 ntBASIC14.71□□□□□ -0.05
UPK1BO75841 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1BO75841 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
UPK1BO75841 AC026396.1-201ENST00000419388 421 ntBASIC14.71□□□□□ -0.05
UPK1BO75841 AC097658.1-201ENST00000475555 843 ntBASIC14.71□□□□□ -0.05
UPK1BO75841 AC113404.2-201ENST00000507884 177 ntBASIC14.71□□□□□ -0.05
UPK1BO75841 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.71□□□□□ -0.05
UPK1BO75841 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1BO75841 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.71□□□□□ -0.05
UPK1BO75841 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1BO75841 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 AL391807.1-203ENST00000604392 2365 ntBASIC14.71□□□□□ -0.05
UPK1BO75841 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 TMBIM7P-203ENST00000641617 1718 ntBASIC14.71□□□□□ -0.05
UPK1BO75841 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1BO75841 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UPK1BO75841 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
UPK1BO75841 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
UPK1BO75841 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UPK1BO75841 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UPK1BO75841 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UPK1BO75841 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.71□□□□□ -0.06
UPK1BO75841 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UPK1BO75841 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UPK1BO75841 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UPK1BO75841 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UPK1BO75841 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.7□□□□□ -0.06
UPK1BO75841 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UPK1BO75841 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 MYCLP1-201ENST00000372451 1075 ntBASIC14.7□□□□□ -0.06
UPK1BO75841 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.7□□□□□ -0.06
UPK1BO75841 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 AL031985.4-201ENST00000642138 673 ntBASIC14.7□□□□□ -0.06
UPK1BO75841 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1BO75841 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms