Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.61■□□□□ 0.73
CTNND1O60716 AC005034.1-201ENST00000426657 489 ntBASIC19.61■□□□□ 0.73
CTNND1O60716 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNND1O60716 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNND1O60716 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.61■□□□□ 0.73
CTNND1O60716 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNND1O60716 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.61■□□□□ 0.73
CTNND1O60716 AL035252.4-201ENST00000624174 288 ntBASIC19.61■□□□□ 0.73
CTNND1O60716 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNND1O60716 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTNND1O60716 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNND1O60716 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNND1O60716 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNND1O60716 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNND1O60716 AP3S2-216ENST00000617003 1561 ntBASIC19.61■□□□□ 0.73
CTNND1O60716 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTNND1O60716 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTNND1O60716 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNND1O60716 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CTNND1O60716 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTNND1O60716 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNND1O60716 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTNND1O60716 AC005225.4-201ENST00000557330 545 ntBASIC19.6■□□□□ 0.73
CTNND1O60716 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.6■□□□□ 0.73
CTNND1O60716 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.6■□□□□ 0.73
CTNND1O60716 AC073592.8-201ENST00000624126 511 ntBASIC19.6■□□□□ 0.73
CTNND1O60716 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNND1O60716 AC068880.1-201ENST00000507289 2297 ntBASIC19.6■□□□□ 0.73
CTNND1O60716 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNND1O60716 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNND1O60716 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.6■□□□□ 0.73
CTNND1O60716 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CTNND1O60716 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNND1O60716 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CTNND1O60716 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.59■□□□□ 0.73
CTNND1O60716 AC027369.6-201ENST00000525520 931 ntBASIC19.59■□□□□ 0.73
CTNND1O60716 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.59■□□□□ 0.73
CTNND1O60716 AC012645.4-201ENST00000610691 1061 ntBASIC19.59■□□□□ 0.73
CTNND1O60716 AC007967.4-201ENST00000614700 386 ntBASIC19.59■□□□□ 0.73
CTNND1O60716 AL590560.3-201ENST00000623350 461 ntBASIC19.59■□□□□ 0.73
CTNND1O60716 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.59■□□□□ 0.73
CTNND1O60716 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CTNND1O60716 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.59■□□□□ 0.73
CTNND1O60716 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNND1O60716 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTNND1O60716 AC100757.3-201ENST00000622361 1406 ntBASIC19.59■□□□□ 0.73
CTNND1O60716 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTNND1O60716 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTNND1O60716 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CTNND1O60716 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNND1O60716 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNND1O60716 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTNND1O60716 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.58■□□□□ 0.73
CTNND1O60716 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.58■□□□□ 0.73
CTNND1O60716 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNND1O60716 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNND1O60716 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNND1O60716 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNND1O60716 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.58■□□□□ 0.72
CTNND1O60716 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.58■□□□□ 0.72
CTNND1O60716 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.58■□□□□ 0.72
CTNND1O60716 AC108860.2-201ENST00000562760 2183 ntBASIC19.58■□□□□ 0.72
CTNND1O60716 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CTNND1O60716 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNND1O60716 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.58■□□□□ 0.72
CTNND1O60716 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CTNND1O60716 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.58■□□□□ 0.72
CTNND1O60716 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNND1O60716 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CTNND1O60716 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.57■□□□□ 0.72
CTNND1O60716 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.57■□□□□ 0.72
CTNND1O60716 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.57■□□□□ 0.72
CTNND1O60716 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CTNND1O60716 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 BCL2-203ENST00000589955 5011 ntBASIC19.57■□□□□ 0.72
CTNND1O60716 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 MRPS18AP1-201ENST00000414458 589 ntBASIC19.57■□□□□ 0.72
CTNND1O60716 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.57■□□□□ 0.72
CTNND1O60716 TSSK5P-201ENST00000423978 907 ntBASIC19.57■□□□□ 0.72
CTNND1O60716 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.57■□□□□ 0.72
CTNND1O60716 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms