Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH7O60245 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PCDH7O60245 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
PCDH7O60245 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 PCDH8P1-201ENST00000428983 2773 ntBASIC16.13■□□□□ 0.17
PCDH7O60245 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDH7O60245 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 PTCHD3P3-201ENST00000403073 906 ntBASIC16.13■□□□□ 0.17
PCDH7O60245 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PCDH7O60245 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDH7O60245 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PCDH7O60245 AC006557.2-201ENST00000592985 1240 ntBASIC16.13■□□□□ 0.17
PCDH7O60245 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH7O60245 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH7O60245 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 AC006504.4-201ENST00000592118 1568 ntBASIC16.13■□□□□ 0.17
PCDH7O60245 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
PCDH7O60245 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDH7O60245 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH7O60245 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 PI4KAP1-204ENST00000612579 1703 ntBASIC16.12■□□□□ 0.17
PCDH7O60245 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH7O60245 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PCDH7O60245 AC087163.2-201ENST00000457299 853 ntBASIC16.12■□□□□ 0.17
PCDH7O60245 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH7O60245 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH7O60245 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH7O60245 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH7O60245 AL805961.1-202ENST00000641562 540 ntBASIC16.12■□□□□ 0.17
PCDH7O60245 AC107918.4-202ENST00000641623 219 ntBASIC16.12■□□□□ 0.17
PCDH7O60245 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH7O60245 TOP3BP1-201ENST00000420768 1380 ntBASIC16.12■□□□□ 0.17
PCDH7O60245 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDH7O60245 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH7O60245 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH7O60245 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH7O60245 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDH7O60245 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH7O60245 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms