Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAF3IP2O43734 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.05■□□□□ -0
TRAF3IP2O43734 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.05■□□□□ -0
TRAF3IP2O43734 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.05■□□□□ -0
TRAF3IP2O43734 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRAF3IP2O43734 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAF3IP2O43734 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAF3IP2O43734 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAF3IP2O43734 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRAF3IP2O43734 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.04■□□□□ -0
TRAF3IP2O43734 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 AC006277.1-201ENST00000624348 1610 ntBASIC15.04■□□□□ -0
TRAF3IP2O43734 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.04■□□□□ -0
TRAF3IP2O43734 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.04■□□□□ -0
TRAF3IP2O43734 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 AC129492.6-201ENST00000611383 1305 ntBASIC15.04■□□□□ -0
TRAF3IP2O43734 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
TRAF3IP2O43734 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.04■□□□□ -0
TRAF3IP2O43734 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.04■□□□□ -0
TRAF3IP2O43734 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 MPDU1-223ENST00000582151 728 ntBASIC15.04■□□□□ -0
TRAF3IP2O43734 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.04■□□□□ -0
TRAF3IP2O43734 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.04■□□□□ -0
TRAF3IP2O43734 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.04■□□□□ -0
TRAF3IP2O43734 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.04■□□□□ -0
TRAF3IP2O43734 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.04■□□□□ -0
TRAF3IP2O43734 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.04■□□□□ -0
TRAF3IP2O43734 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAF3IP2O43734 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAF3IP2O43734 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 AC009947.1-201ENST00000444350 727 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 FDX1P1-201ENST00000449115 551 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 RNA5SP415-201ENST00000517246 115 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.03■□□□□ -0
TRAF3IP2O43734 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 UNC93B6-202ENST00000528242 690 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.03■□□□□ -0
TRAF3IP2O43734 MIR4492-201ENST00000581627 80 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.03■□□□□ -0
TRAF3IP2O43734 AC010654.1-201ENST00000615722 808 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.03■□□□□ -0
TRAF3IP2O43734 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 HLA-A-202ENST00000376806 1854 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 AC084018.2-201ENST00000613093 2607 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms