Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.99□□□□□ -0.01
SGCEO43556 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.99□□□□□ -0.01
SGCEO43556 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.99□□□□□ -0.01
SGCEO43556 MTDHP4-201ENST00000600287 670 ntBASIC14.99□□□□□ -0.01
SGCEO43556 AC064862.7-201ENST00000604520 867 ntBASIC14.99□□□□□ -0.01
SGCEO43556 AL353135.1-201ENST00000606729 504 ntBASIC14.99□□□□□ -0.01
SGCEO43556 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SGCEO43556 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.99□□□□□ -0.01
SGCEO43556 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SGCEO43556 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.98□□□□□ -0.01
SGCEO43556 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SGCEO43556 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.98□□□□□ -0.01
SGCEO43556 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.98□□□□□ -0.01
SGCEO43556 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
SGCEO43556 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.98□□□□□ -0.01
SGCEO43556 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 AF238378.1-201ENST00000526806 358 ntBASIC14.98□□□□□ -0.01
SGCEO43556 AC139887.3-201ENST00000568585 713 ntBASIC14.98□□□□□ -0.01
SGCEO43556 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SGCEO43556 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 AC005915.1-201ENST00000624912 2018 ntBASIC14.98□□□□□ -0.01
SGCEO43556 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.98□□□□□ -0.01
SGCEO43556 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SGCEO43556 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SGCEO43556 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 AC105020.1-201ENST00000435356 2205 ntBASIC14.97□□□□□ -0.01
SGCEO43556 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.97□□□□□ -0.01
SGCEO43556 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SGCEO43556 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.97□□□□□ -0.01
SGCEO43556 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SGCEO43556 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SGCEO43556 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.97□□□□□ -0.01
SGCEO43556 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SGCEO43556 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.97□□□□□ -0.01
SGCEO43556 AL139424.1-201ENST00000607572 797 ntBASIC14.97□□□□□ -0.01
SGCEO43556 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.97□□□□□ -0.01
SGCEO43556 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.97□□□□□ -0.01
SGCEO43556 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SGCEO43556 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SGCEO43556 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SGCEO43556 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SGCEO43556 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SGCEO43556 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.96□□□□□ -0.01
SGCEO43556 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SGCEO43556 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SGCEO43556 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.96□□□□□ -0.01
SGCEO43556 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.96□□□□□ -0.01
SGCEO43556 NKILA-202ENST00000614771 2598 ntBASIC14.96□□□□□ -0.01
SGCEO43556 AL590787.1-201ENST00000568856 1315 ntBASIC14.96□□□□□ -0.01
SGCEO43556 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
SGCEO43556 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms