Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYRM1O43325 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYRM1O43325 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.54□□□□□ -0.08
LYRM1O43325 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.54□□□□□ -0.08
LYRM1O43325 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYRM1O43325 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYRM1O43325 PRAL-201ENST00000624952 3286 ntBASIC14.54□□□□□ -0.08
LYRM1O43325 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYRM1O43325 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYRM1O43325 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYRM1O43325 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYRM1O43325 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYRM1O43325 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.53□□□□□ -0.08
LYRM1O43325 GGT4P-201ENST00000623672 1708 ntBASIC14.53□□□□□ -0.08
LYRM1O43325 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 GPR89P-201ENST00000407924 1495 ntBASIC14.53□□□□□ -0.08
LYRM1O43325 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.53□□□□□ -0.08
LYRM1O43325 SEC1P-202ENST00000473944 940 ntBASIC14.53□□□□□ -0.08
LYRM1O43325 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.53□□□□□ -0.08
LYRM1O43325 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 AC006449.6-201ENST00000612330 2296 ntBASIC14.53□□□□□ -0.08
LYRM1O43325 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.53□□□□□ -0.08
LYRM1O43325 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYRM1O43325 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.53□□□□□ -0.08
LYRM1O43325 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LYRM1O43325 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.52□□□□□ -0.08
LYRM1O43325 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.52□□□□□ -0.08
LYRM1O43325 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.52□□□□□ -0.08
LYRM1O43325 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.52□□□□□ -0.08
LYRM1O43325 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
LYRM1O43325 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.52□□□□□ -0.08
LYRM1O43325 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LYRM1O43325 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LYRM1O43325 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LYRM1O43325 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYRM1O43325 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.52□□□□□ -0.09
LYRM1O43325 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.52□□□□□ -0.09
LYRM1O43325 AC097488.1-201ENST00000507834 756 ntBASIC14.52□□□□□ -0.09
LYRM1O43325 AP003097.1-201ENST00000530657 1135 ntBASIC14.52□□□□□ -0.09
LYRM1O43325 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
LYRM1O43325 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYRM1O43325 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYRM1O43325 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYRM1O43325 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms