Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
PHGDHO43175 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 KRT16P4-201ENST00000453883 522 ntBASIC16.83■□□□□ 0.28
PHGDHO43175 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.83■□□□□ 0.28
PHGDHO43175 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.83■□□□□ 0.28
PHGDHO43175 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 AL353135.1-201ENST00000606729 504 ntBASIC16.83■□□□□ 0.28
PHGDHO43175 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 AL021920.2-201ENST00000624828 1351 ntBASIC16.83■□□□□ 0.28
PHGDHO43175 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.83■□□□□ 0.28
PHGDHO43175 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PHGDHO43175 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.83■□□□□ 0.28
PHGDHO43175 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.82■□□□□ 0.28
PHGDHO43175 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.82■□□□□ 0.28
PHGDHO43175 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.82■□□□□ 0.28
PHGDHO43175 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.82■□□□□ 0.28
PHGDHO43175 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHGDHO43175 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PHGDHO43175 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.81■□□□□ 0.28
PHGDHO43175 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PHGDHO43175 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PHGDHO43175 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
PHGDHO43175 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PHGDHO43175 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.81■□□□□ 0.28
PHGDHO43175 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 AC005052.1-201ENST00000625181 2492 ntBASIC16.81■□□□□ 0.28
PHGDHO43175 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms