Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
UPK2O00526 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 PCDH8P1-201ENST00000428983 2773 ntBASIC13.56□□□□□ -0.24
UPK2O00526 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
UPK2O00526 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 ALOX12P2-203ENST00000570921 1945 ntBASIC13.56□□□□□ -0.24
UPK2O00526 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
UPK2O00526 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 AL662844.4-201ENST00000606367 2838 ntBASIC13.56□□□□□ -0.24
UPK2O00526 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
UPK2O00526 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK2O00526 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
UPK2O00526 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK2O00526 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK2O00526 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
UPK2O00526 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK2O00526 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
UPK2O00526 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UPK2O00526 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UPK2O00526 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 AL356309.3-201ENST00000624132 1934 ntBASIC13.55□□□□□ -0.24
UPK2O00526 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
UPK2O00526 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.55□□□□□ -0.24
UPK2O00526 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.55□□□□□ -0.24
UPK2O00526 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 FOSL1P1-201ENST00000511041 816 ntBASIC13.55□□□□□ -0.24
UPK2O00526 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
UPK2O00526 AL139424.1-201ENST00000607572 797 ntBASIC13.55□□□□□ -0.24
UPK2O00526 AL589182.2-201ENST00000619332 1049 ntBASIC13.55□□□□□ -0.24
UPK2O00526 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK2O00526 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK2O00526 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 AL391005.1-201ENST00000623953 2435 ntBASIC13.55□□□□□ -0.24
UPK2O00526 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK2O00526 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK2O00526 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK2O00526 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
UPK2O00526 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK2O00526 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.54□□□□□ -0.24
UPK2O00526 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.54□□□□□ -0.24
UPK2O00526 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 ARMC10P1-201ENST00000313754 855 ntBASIC13.54□□□□□ -0.24
UPK2O00526 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK2O00526 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.54□□□□□ -0.24
UPK2O00526 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK2O00526 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK2O00526 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms