Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXN3O00409 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXN3O00409 GGTLC5P-201ENST00000617623 998 ntBASIC18.06■□□□□ 0.48
FOXN3O00409 FAM215A-202ENST00000632077 792 ntBASIC18.06■□□□□ 0.48
FOXN3O00409 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXN3O00409 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXN3O00409 AC092364.2-201ENST00000596710 2692 ntBASIC18.06■□□□□ 0.48
FOXN3O00409 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
FOXN3O00409 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXN3O00409 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXN3O00409 SLC22A20-204ENST00000530038 1673 ntBASIC18.06■□□□□ 0.48
FOXN3O00409 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXN3O00409 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 AC004870.1-201ENST00000315132 882 ntBASIC18.05■□□□□ 0.48
FOXN3O00409 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.05■□□□□ 0.48
FOXN3O00409 IGHV3-65-201ENST00000523210 341 ntBASIC18.05■□□□□ 0.48
FOXN3O00409 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
FOXN3O00409 KRT126P-201ENST00000549467 1181 ntBASIC18.05■□□□□ 0.48
FOXN3O00409 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXN3O00409 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXN3O00409 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXN3O00409 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXN3O00409 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN3O00409 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXN3O00409 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 AC018695.7-201ENST00000624587 2492 ntBASIC18.04■□□□□ 0.48
FOXN3O00409 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN3O00409 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
FOXN3O00409 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXN3O00409 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN3O00409 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN3O00409 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXN3O00409 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 AL049840.3-201ENST00000602669 611 ntBASIC18.04■□□□□ 0.48
FOXN3O00409 MIR1199-201ENST00000621445 119 ntBASIC18.04■□□□□ 0.48
FOXN3O00409 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN3O00409 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN3O00409 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN3O00409 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FOXN3O00409 AC131009.4-201ENST00000624048 1740 ntBASIC18.03■□□□□ 0.48
FOXN3O00409 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN3O00409 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 AC005052.1-201ENST00000625181 2492 ntBASIC18.03■□□□□ 0.48
FOXN3O00409 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN3O00409 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN3O00409 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms