Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.14■□□□□ 0.17
PDLIM1O00151 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
PDLIM1O00151 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PDLIM1O00151 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM1O00151 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM1O00151 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM1O00151 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 PCED1CP-201ENST00000419887 785 ntBASIC16.13■□□□□ 0.17
PDLIM1O00151 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDLIM1O00151 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM1O00151 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM1O00151 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PDLIM1O00151 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM1O00151 AL358472.4-201ENST00000633140 710 ntBASIC16.13■□□□□ 0.17
PDLIM1O00151 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM1O00151 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM1O00151 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM1O00151 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM1O00151 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PDLIM1O00151 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PDLIM1O00151 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.12■□□□□ 0.17
PDLIM1O00151 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDLIM1O00151 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM1O00151 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDLIM1O00151 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.12■□□□□ 0.17
PDLIM1O00151 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.12■□□□□ 0.17
PDLIM1O00151 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PDLIM1O00151 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.12■□□□□ 0.17
PDLIM1O00151 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM1O00151 AC091076.1-201ENST00000610741 619 ntBASIC16.12■□□□□ 0.17
PDLIM1O00151 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.12■□□□□ 0.17
PDLIM1O00151 AP000550.4-202ENST00000639755 178 ntBASIC16.12■□□□□ 0.17
PDLIM1O00151 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PDLIM1O00151 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDLIM1O00151 TNRC18P2-201ENST00000417666 2714 ntBASIC16.12■□□□□ 0.17
PDLIM1O00151 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM1O00151 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDLIM1O00151 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM1O00151 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM1O00151 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PDLIM1O00151 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM1O00151 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.11■□□□□ 0.17
PDLIM1O00151 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PDLIM1O00151 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM1O00151 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.11■□□□□ 0.17
PDLIM1O00151 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.11■□□□□ 0.17
PDLIM1O00151 KRT89P-201ENST00000620027 1478 ntBASIC16.11■□□□□ 0.17
PDLIM1O00151 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM1O00151 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM1O00151 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM1O00151 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PDLIM1O00151 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM1O00151 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.11■□□□□ 0.17
PDLIM1O00151 AL645929.1-201ENST00000420084 975 ntBASIC16.11■□□□□ 0.17
PDLIM1O00151 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.11■□□□□ 0.17
PDLIM1O00151 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM1O00151 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.11■□□□□ 0.17
PDLIM1O00151 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.11■□□□□ 0.17
PDLIM1O00151 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms