Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NACAE9PAV3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 AC096582.2-201ENST00000510860 516 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 AL139327.4-201ENST00000612362 153 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 AL353593.2-201ENST00000602529 1483 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 PCDHB19P-201ENST00000570871 2371 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 AL022342.1-201ENST00000400363 863 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
NACAE9PAV3 RN7SL606P-201ENST00000472779 293 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.41□□□□□ -0.42
NACAE9PAV3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.41□□□□□ -0.42
NACAE9PAV3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NACAE9PAV3 FLJ38576-201ENST00000623820 2459 ntBASIC12.41□□□□□ -0.42
NACAE9PAV3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NACAE9PAV3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.4□□□□□ -0.42
NACAE9PAV3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NACAE9PAV3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.4□□□□□ -0.42
NACAE9PAV3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NACAE9PAV3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NACAE9PAV3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.4□□□□□ -0.42
NACAE9PAV3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.4□□□□□ -0.42
NACAE9PAV3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.4□□□□□ -0.42
NACAE9PAV3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NACAE9PAV3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms