Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 CICP13-201ENST00000422015 2789 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AL031731.1-201ENST00000642131 2094 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 UNC93B2-201ENST00000285383 730 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AC003669.1-201ENST00000334569 611 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AP001412.1-201ENST00000608405 714 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AL671710.1-201ENST00000610245 2349 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AC113410.3-201ENST00000623366 203 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 AC136621.1-201ENST00000624017 2304 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.9□□□□□ -0.5
LINC01546A6NGU7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01546A6NGU7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
LINC01546A6NGU7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC01546A6NGU7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC01546A6NGU7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.9□□□□□ -0.51
LINC01546A6NGU7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 EGLN1P1-201ENST00000531623 762 ntBASIC11.89□□□□□ -0.51
LINC01546A6NGU7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 AC005332.3-201ENST00000589904 676 ntBASIC11.89□□□□□ -0.51
LINC01546A6NGU7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.89□□□□□ -0.51
LINC01546A6NGU7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms