Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRDV1A0A1B0GX56 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 GGT3P-204ENST00000453783 1664 ntBASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 FAM220CP-201ENST00000395253 831 ntBASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 AC098590.1-201ENST00000468126 897 ntBASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 AC006449.6-201ENST00000612330 2296 ntBASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRDV1A0A1B0GX56 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AC003669.1-201ENST00000334569 611 ntBASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AL355075.4-201ENST00000554988 638 ntBASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AC013467.2-201ENST00000605472 835 ntBASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AL023973.1-201ENST00000624619 620 ntBASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRDV1A0A1B0GX56 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms