Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 HCG4B-203ENST00000450128 991 ntBASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 HLA-J-202ENST00000469281 1241 ntBASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC034105.1-201ENST00000563488 319 ntBASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 ACTL9-202ENST00000612068 1252 ntBASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 SLC22A20-204ENST00000530038 1673 ntBASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC196A0A1B0GTZ2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 PMS2P1-201ENST00000431037 1228 ntBASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 AL603756.1-201ENST00000606511 2163 ntBASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC196A0A1B0GTZ2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC096734.2-201ENST00000562054 433 ntBASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC120114.3-201ENST00000611923 658 ntBASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC196A0A1B0GTZ2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 AC006538.1-201ENST00000567905 1585 ntBASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 FLJ38576-201ENST00000623820 2459 ntBASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms