Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV5-3A0A0A0MS03 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 KRT16P4-201ENST00000453883 522 ntBASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 AC087163.2-201ENST00000457299 853 ntBASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 AL139288.1-201ENST00000623748 933 ntBASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV5-3A0A0A0MS03 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 KRT18P21-201ENST00000515767 1272 ntBASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 AC091167.2-201ENST00000579581 588 ntBASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV5-3A0A0A0MS03 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 RBM17P3-201ENST00000417687 1192 ntBASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms