Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 AC142381.1-201ENST00000426099 345 ntBASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 KRT18P34-201ENST00000488218 1270 ntBASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 AL590560.3-201ENST00000623350 461 ntBASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC187A0A096LP49 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 CR383656.12-201ENST00000549567 513 ntBASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 CYP2A7P1-201ENST00000595391 815 ntBASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 AC007967.4-201ENST00000614700 386 ntBASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 AC016396.2-201ENST00000562575 1417 ntBASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC187A0A096LP49 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 MRPS18AP1-201ENST00000414458 589 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 SPDYE22P-201ENST00000582158 798 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms