Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAPPC1Q9Y5R8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAPPC1Q9Y5R8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAPPC1Q9Y5R8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 PRAL-201ENST00000624952 3286 ntBASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 KRT18P23-201ENST00000435622 1283 ntBASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 PTENP1-202ENST00000532280 3996 ntBASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAPPC1Q9Y5R8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 C8orf49-201ENST00000525043 1968 ntBASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AC007292.2-201ENST00000593524 1812 ntBASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 KRT8P7-201ENST00000533003 1432 ntBASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAPPC1Q9Y5R8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms