Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 CNN2P11-201ENST00000429351 262 ntBASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
PCDHB11Q9Y5F2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 CEND1P1-201ENST00000451006 455 ntBASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 AL513190.1-201ENST00000621254 727 ntBASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB11Q9Y5F2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 OR6D1P-203ENST00000641209 4860 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AC060834.1-201ENST00000443027 2032 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 AL645939.2-201ENST00000427340 991 ntBASIC16.54■□□□□ 0.24
PCDHB11Q9Y5F2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms