Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 AC011467.4-201ENST00000594891 528 ntBASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTDP1Q9Y5B0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 AC109322.1-201ENST00000524499 1264 ntBASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 AL031055.1-201ENST00000606362 631 ntBASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 AC093512.1-201ENST00000617969 520 ntBASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 UXT-AS1-201ENST00000590504 1525 ntBASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTDP1Q9Y5B0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.45■□□□□ 0.7
CTDP1Q9Y5B0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms