Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PKP3Q9Y446 TOP3BP1-201ENST00000420768 1380 ntBASIC16.98■□□□□ 0.31
PKP3Q9Y446 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PKP3Q9Y446 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PKP3Q9Y446 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PKP3Q9Y446 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PKP3Q9Y446 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PKP3Q9Y446 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PKP3Q9Y446 AC084018.2-201ENST00000613093 2607 ntBASIC16.98■□□□□ 0.31
PKP3Q9Y446 AC124067.4-201ENST00000519691 2379 ntBASIC16.97■□□□□ 0.31
PKP3Q9Y446 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.97■□□□□ 0.31
PKP3Q9Y446 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 MIR4751-201ENST00000578027 74 ntBASIC16.97■□□□□ 0.31
PKP3Q9Y446 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.97■□□□□ 0.31
PKP3Q9Y446 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PKP3Q9Y446 AC129492.6-201ENST00000611383 1305 ntBASIC16.96■□□□□ 0.31
PKP3Q9Y446 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 PCDHB17P-201ENST00000539533 2393 ntBASIC16.96■□□□□ 0.31
PKP3Q9Y446 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 SLC25A6P2-201ENST00000497974 877 ntBASIC16.96■□□□□ 0.31
PKP3Q9Y446 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 IGHV3-22-201ENST00000520721 359 ntBASIC16.96■□□□□ 0.31
PKP3Q9Y446 UNC93B6-202ENST00000528242 690 ntBASIC16.96■□□□□ 0.31
PKP3Q9Y446 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 AC010654.1-201ENST00000615722 808 ntBASIC16.96■□□□□ 0.31
PKP3Q9Y446 AC004790.2-201ENST00000623588 572 ntBASIC16.96■□□□□ 0.31
PKP3Q9Y446 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PKP3Q9Y446 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PKP3Q9Y446 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PKP3Q9Y446 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PKP3Q9Y446 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.96■□□□□ 0.3
PKP3Q9Y446 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.96■□□□□ 0.3
PKP3Q9Y446 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PKP3Q9Y446 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 PRSS29P-201ENST00000440800 595 ntBASIC16.95■□□□□ 0.3
PKP3Q9Y446 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 RNA5SP415-201ENST00000517246 115 ntBASIC16.95■□□□□ 0.3
PKP3Q9Y446 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.95■□□□□ 0.3
PKP3Q9Y446 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms