Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 SPDYE21P-201ENST00000413323 827 ntBASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 AC132008.2-207ENST00000454517 770 ntBASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 SIGLEC30P-201ENST00000455569 941 ntBASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 MIR3652-201ENST00000579335 131 ntBASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RHBDD3Q9Y3P4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 AL391005.1-201ENST00000623953 2435 ntBASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RHBDD3Q9Y3P4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.82□□□□□ -0.04
RHBDD3Q9Y3P4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms