Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPH3AQ9Y2J0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPH3AQ9Y2J0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPH3AQ9Y2J0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPH3AQ9Y2J0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.54■□□□□ 0.08
RPH3AQ9Y2J0 EGFEM1P-202ENST00000431685 1563 ntBASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.53■□□□□ 0.08
RPH3AQ9Y2J0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 PGAM5P1-201ENST00000518923 814 ntBASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 AP001160.2-201ENST00000596071 487 ntBASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RPH3AQ9Y2J0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3AQ9Y2J0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 SLC25A1P3-201ENST00000395415 828 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 MRPL20P1-201ENST00000400819 433 ntBASIC15.51■□□□□ 0.07
RPH3AQ9Y2J0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms