Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 AC006538.1-201ENST00000567905 1585 ntBASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBQLN2Q9UHD9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 AC026748.1-201ENST00000624349 3251 ntBASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN2Q9UHD9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 CICP14-201ENST00000629111 2732 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 SDHAP2-201ENST00000455183 2001 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 MESTP1-201ENST00000404287 994 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 AC008040.2-201ENST00000461049 708 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 AC091390.4-202ENST00000476426 537 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 AC116562.2-201ENST00000507042 360 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 BX088651.1-201ENST00000540551 451 ntBASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN2Q9UHD9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 AC099343.3-201ENST00000605834 2503 ntBASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 CRYGFP-201ENST00000418459 633 ntBASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 AC097488.1-201ENST00000507834 756 ntBASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBQLN2Q9UHD9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms