Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 KRT8P23-201ENST00000560090 1207 ntBASIC19.64■□□□□ 0.73
EFCC1Q9HA90 AC009118.2-201ENST00000613275 655 ntBASIC19.64■□□□□ 0.73
EFCC1Q9HA90 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 AL354751.1-201ENST00000412768 1863 ntBASIC19.64■□□□□ 0.73
EFCC1Q9HA90 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFCC1Q9HA90 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 AC107918.2-201ENST00000530817 355 ntBASIC19.63■□□□□ 0.73
EFCC1Q9HA90 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 MIR6080-201ENST00000617359 66 ntBASIC19.63■□□□□ 0.73
EFCC1Q9HA90 MIR6799-201ENST00000620297 69 ntBASIC19.63■□□□□ 0.73
EFCC1Q9HA90 AL161645.1-201ENST00000622716 1255 ntBASIC19.63■□□□□ 0.73
EFCC1Q9HA90 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 AL162727.3-201ENST00000635661 2787 ntBASIC19.63■□□□□ 0.73
EFCC1Q9HA90 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 PCDHA12-202ENST00000613593 2588 ntBASIC19.63■□□□□ 0.73
EFCC1Q9HA90 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFCC1Q9HA90 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 AC241585.1-201ENST00000433527 519 ntBASIC19.62■□□□□ 0.73
EFCC1Q9HA90 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.62■□□□□ 0.73
EFCC1Q9HA90 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 AC004890.2-204ENST00000481968 304 ntBASIC19.62■□□□□ 0.73
EFCC1Q9HA90 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 LINC01225-203ENST00000563550 1244 ntBASIC19.62■□□□□ 0.73
EFCC1Q9HA90 AL139327.4-201ENST00000612362 153 ntBASIC19.62■□□□□ 0.73
EFCC1Q9HA90 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCC1Q9HA90 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCC1Q9HA90 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCC1Q9HA90 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
EFCC1Q9HA90 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.61■□□□□ 0.73
EFCC1Q9HA90 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCC1Q9HA90 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCC1Q9HA90 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms