Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 AL590326.2-201ENST00000625139 305 ntBASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 AP002414.1-201ENST00000391405 1147 ntBASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 LINC00265-3P-201ENST00000447588 903 ntBASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 AC104819.1-201ENST00000504587 486 ntBASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 AC012615.1-201ENST00000565797 1299 ntBASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 HYMAI-201ENST00000635591 3347 ntBASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J2Q9GZM3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 ABCD1P5-201ENST00000445663 754 ntBASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 HLA-J-202ENST00000469281 1241 ntBASIC15.65■□□□□ 0.1
POLR2J2Q9GZM3 AC074051.2-201ENST00000565115 352 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms