Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 UNC93B6-202ENST00000528242 690 ntBASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 AC004706.3-202ENST00000621574 984 ntBASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 AC068418.2-201ENST00000577309 3703 ntBASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 AC006504.4-201ENST00000592118 1568 ntBASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 KRT18P27-201ENST00000427733 1299 ntBASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 AL671883.3-201ENST00000603274 991 ntBASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 PCDHB19P-201ENST00000570871 2371 ntBASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF1Q9BSM1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 LYSMD4-203ENST00000378904 2122 ntBASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 AC073621.1-201ENST00000392730 636 ntBASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 LINC00982-205ENST00000420957 435 ntBASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 MED15P5-201ENST00000423150 992 ntBASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 AC145285.3-201ENST00000564603 959 ntBASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 AL139424.1-201ENST00000607572 797 ntBASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 AC027601.4-201ENST00000611259 610 ntBASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms