Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 AP002490.2-201ENST00000524791 560 ntBASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 BNIP3P18-201ENST00000593976 575 ntBASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 KRT18P1-202ENST00000452408 1331 ntBASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 AC004817.3-201ENST00000602957 2129 ntBASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.3□□□□□ -0.12
HDHD3Q9BSH5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 AC097637.2-201ENST00000624096 1997 ntBASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 TOB2P1-201ENST00000469761 992 ntBASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms