Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 AL589182.2-201ENST00000619332 1049 ntBASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 AC004706.3-202ENST00000621574 984 ntBASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 AC002310.6-201ENST00000624451 1377 ntBASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 AL512652.2-201ENST00000625156 1716 ntBASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AC006504.4-201ENST00000592118 1568 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 PTCHD3P3-201ENST00000403073 906 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 ELK2BP-201ENST00000415014 1224 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AC087163.2-201ENST00000457299 853 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 EMBP1-201ENST00000458200 901 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SLC25A6P2-201ENST00000497974 877 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AF238378.1-201ENST00000526806 358 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 MIR4492-201ENST00000581627 80 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AC008608.2-201ENST00000606089 416 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 REXO1L6P-202ENST00000619970 1078 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 AC007950.2-201ENST00000615045 2347 ntBASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERPUD2Q9BSE4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 TOP3BP1-201ENST00000420768 1380 ntBASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.48■□□□□ 0.39
HERPUD2Q9BSE4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms