Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 AC010331.1-201ENST00000611423 582 ntBASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 AC066615.1-201ENST00000640911 628 ntBASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 AL031731.1-201ENST00000642131 2094 ntBASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BPIFA3Q9BQP9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 TPSP2-201ENST00000561760 610 ntBASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 MIR4492-201ENST00000581627 80 ntBASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BPIFA3Q9BQP9 KRT8P39-201ENST00000396270 1433 ntBASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 POM121L3P-201ENST00000419331 1163 ntBASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 ABCD1P5-201ENST00000445663 754 ntBASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 PRYP5-201ENST00000451909 266 ntBASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 AL590326.2-201ENST00000625139 305 ntBASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 AL121956.5-201ENST00000625261 221 ntBASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 KRT18P1-202ENST00000452408 1331 ntBASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BPIFA3Q9BQP9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms