Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 HCG4B-203ENST00000450128 991 ntBASIC17.13■□□□□ 0.33
SEMA3CQ99985 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SEMA3CQ99985 AP002490.2-201ENST00000524791 560 ntBASIC17.13■□□□□ 0.33
SEMA3CQ99985 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.13■□□□□ 0.33
SEMA3CQ99985 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA3CQ99985 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA3CQ99985 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA3CQ99985 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA3CQ99985 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SEMA3CQ99985 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA3CQ99985 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SEMA3CQ99985 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SEMA3CQ99985 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA3CQ99985 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA3CQ99985 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SEMA3CQ99985 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA3CQ99985 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 AL391256.1-201ENST00000443260 1855 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 AC011676.5-201ENST00000624864 2660 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 AC078925.2-201ENST00000624013 1973 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 IGLL3P-201ENST00000412472 434 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 AC007967.2-201ENST00000432613 625 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 FAM185BP-201ENST00000443595 716 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 CXCL1P1-201ENST00000502804 216 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 MPDU1-223ENST00000582151 728 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 ACTL9-202ENST00000612068 1252 ntBASIC17.12■□□□□ 0.33
SEMA3CQ99985 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA3CQ99985 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA3CQ99985 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 AC091167.2-201ENST00000579581 588 ntBASIC17.11■□□□□ 0.33
SEMA3CQ99985 AC005412.3-201ENST00000580309 715 ntBASIC17.11■□□□□ 0.33
SEMA3CQ99985 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 AL353732.1-201ENST00000569618 1459 ntBASIC17.11■□□□□ 0.33
SEMA3CQ99985 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA3CQ99985 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA3CQ99985 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms