Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 SPCS2P4-201ENST00000436160 681 ntBASIC16.14■□□□□ 0.17
CMKLR1Q99788 KLF2P3-201ENST00000451977 1087 ntBASIC16.14■□□□□ 0.17
CMKLR1Q99788 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 AC133963.1-201ENST00000504166 1679 ntBASIC16.14■□□□□ 0.17
CMKLR1Q99788 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CMKLR1Q99788 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMKLR1Q99788 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 SPDYE7P-202ENST00000420373 878 ntBASIC16.13■□□□□ 0.17
CMKLR1Q99788 FAM58DP-201ENST00000428076 619 ntBASIC16.13■□□□□ 0.17
CMKLR1Q99788 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 AC051619.7-201ENST00000568314 623 ntBASIC16.13■□□□□ 0.17
CMKLR1Q99788 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 AC138761.1-201ENST00000584393 385 ntBASIC16.13■□□□□ 0.17
CMKLR1Q99788 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 GNAS-203ENST00000306120 1878 ntBASIC16.13■□□□□ 0.17
CMKLR1Q99788 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 AC012317.2-201ENST00000623305 2251 ntBASIC16.13■□□□□ 0.17
CMKLR1Q99788 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMKLR1Q99788 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CMKLR1Q99788 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMKLR1Q99788 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 AL355312.1-201ENST00000407115 2176 ntBASIC16.12■□□□□ 0.17
CMKLR1Q99788 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMKLR1Q99788 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMKLR1Q99788 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CMKLR1Q99788 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 MIR943-201ENST00000401286 94 ntBASIC16.12■□□□□ 0.17
CMKLR1Q99788 AC107890.1-201ENST00000422478 521 ntBASIC16.12■□□□□ 0.17
CMKLR1Q99788 AC055876.3-201ENST00000431496 288 ntBASIC16.12■□□□□ 0.17
CMKLR1Q99788 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 AC125807.1-201ENST00000483097 614 ntBASIC16.12■□□□□ 0.17
CMKLR1Q99788 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.12■□□□□ 0.17
CMKLR1Q99788 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CMKLR1Q99788 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms