Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.03■□□□□ -0
SPENQ96T58 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 AC005412.3-201ENST00000580309 715 ntBASIC15.03■□□□□ -0
SPENQ96T58 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.03■□□□□ -0
SPENQ96T58 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.03■□□□□ -0
SPENQ96T58 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
SPENQ96T58 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SPENQ96T58 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SPENQ96T58 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.02■□□□□ -0
SPENQ96T58 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPENQ96T58 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.02□□□□□ -0.01
SPENQ96T58 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 RPL37AP1-201ENST00000412502 279 ntBASIC15.02□□□□□ -0.01
SPENQ96T58 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.02□□□□□ -0.01
SPENQ96T58 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.02□□□□□ -0.01
SPENQ96T58 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.02□□□□□ -0.01
SPENQ96T58 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 FAM86MP-201ENST00000340703 885 ntBASIC15.02□□□□□ -0.01
SPENQ96T58 AC004945.1-201ENST00000416738 983 ntBASIC15.02□□□□□ -0.01
SPENQ96T58 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.02□□□□□ -0.01
SPENQ96T58 AC135586.1-201ENST00000539323 574 ntBASIC15.02□□□□□ -0.01
SPENQ96T58 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.02□□□□□ -0.01
SPENQ96T58 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPENQ96T58 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.02□□□□□ -0.01
SPENQ96T58 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.01□□□□□ -0.01
SPENQ96T58 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPENQ96T58 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 AL353779.1-201ENST00000434793 351 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 INE1-201ENST00000456273 945 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SPENQ96T58 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPENQ96T58 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.01□□□□□ -0.01
SPENQ96T58 AL583810.1-201ENST00000553344 1045 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 AL133215.2-201ENST00000609242 977 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 AL109936.8-201ENST00000641772 604 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 AC092171.3-201ENST00000610122 2651 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPENQ96T58 AC068880.1-201ENST00000507289 2297 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 AC087499.5-201ENST00000452760 1342 ntBASIC15.01□□□□□ -0.01
SPENQ96T58 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SPENQ96T58 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.01□□□□□ -0.01
SPENQ96T58 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPENQ96T58 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SPENQ96T58 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms