Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 AC002472.2-201ENST00000442739 958 ntBASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 COX20P2-201ENST00000452636 358 ntBASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 HLA-J-202ENST00000469281 1241 ntBASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 TEX28P1-201ENST00000613479 1221 ntBASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 TEX28P2-201ENST00000617764 1221 ntBASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 AC073592.8-201ENST00000624126 511 ntBASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDK5RAP2Q96SN8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 AL512652.2-201ENST00000625156 1716 ntBASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP2Q96SN8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 RN7SL204P-201ENST00000582831 262 ntBASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 AC008761.3-201ENST00000624803 892 ntBASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 GGT3P-204ENST00000453783 1664 ntBASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms