Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 RHOQP3-201ENST00000437982 621 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AL591424.1-201ENST00000442569 1213 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 KRT18P2-201ENST00000447938 1258 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AL513480.1-201ENST00000451731 511 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AC087641.1-201ENST00000557561 1021 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AC018845.2-201ENST00000568326 409 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 CYP2A7P1-201ENST00000595391 815 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AP001350.2-201ENST00000625104 1094 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 AGGF1P2-201ENST00000426656 2106 ntBASIC14.02□□□□□ -0.16
GAFA1Q96PS6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 AC012569.1-201ENST00000591191 1524 ntBASIC14.02□□□□□ -0.16
GAFA1Q96PS6 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.02□□□□□ -0.16
GAFA1Q96PS6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 AP000347.1-202ENST00000435868 847 ntBASIC14.02□□□□□ -0.17
GAFA1Q96PS6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 KRT18P3-201ENST00000451602 1288 ntBASIC14.02□□□□□ -0.17
GAFA1Q96PS6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 RNA5SP416-201ENST00000516838 111 ntBASIC14.02□□□□□ -0.17
GAFA1Q96PS6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 FAM197Y3-203ENST00000618346 717 ntBASIC14.02□□□□□ -0.17
GAFA1Q96PS6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 AC011676.5-201ENST00000624864 2660 ntBASIC14.02□□□□□ -0.17
GAFA1Q96PS6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAFA1Q96PS6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GAFA1Q96PS6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms