Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHDQ96IW2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.91■□□□□ 0.3
SHDQ96IW2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.91■□□□□ 0.3
SHDQ96IW2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.91■□□□□ 0.3
SHDQ96IW2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
SHDQ96IW2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.91■□□□□ 0.3
SHDQ96IW2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.91■□□□□ 0.3
SHDQ96IW2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.91■□□□□ 0.3
SHDQ96IW2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.91■□□□□ 0.3
SHDQ96IW2 RAB43P1-201ENST00000561790 589 ntBASIC16.91■□□□□ 0.3
SHDQ96IW2 AC105021.1-202ENST00000570572 669 ntBASIC16.91■□□□□ 0.3
SHDQ96IW2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.91■□□□□ 0.3
SHDQ96IW2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.91■□□□□ 0.3
SHDQ96IW2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.9■□□□□ 0.3
SHDQ96IW2 MIR1909-201ENST00000411312 80 ntBASIC16.9■□□□□ 0.3
SHDQ96IW2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 RN7SL618P-201ENST00000477850 296 ntBASIC16.9■□□□□ 0.3
SHDQ96IW2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 DOC2GP-202ENST00000514950 1163 ntBASIC16.9■□□□□ 0.3
SHDQ96IW2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.9■□□□□ 0.3
SHDQ96IW2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
SHDQ96IW2 KRT17P8-201ENST00000540749 863 ntBASIC16.9■□□□□ 0.3
SHDQ96IW2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.9■□□□□ 0.3
SHDQ96IW2 AL079307.3-201ENST00000556114 283 ntBASIC16.9■□□□□ 0.3
SHDQ96IW2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.9■□□□□ 0.3
SHDQ96IW2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.9■□□□□ 0.3
SHDQ96IW2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SHDQ96IW2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHDQ96IW2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
SHDQ96IW2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SHDQ96IW2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
SHDQ96IW2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHDQ96IW2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHDQ96IW2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHDQ96IW2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHDQ96IW2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SHDQ96IW2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHDQ96IW2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHDQ96IW2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.89■□□□□ 0.29
SHDQ96IW2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
SHDQ96IW2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.89■□□□□ 0.29
SHDQ96IW2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.89■□□□□ 0.29
SHDQ96IW2 GNAQP1-201ENST00000444815 1067 ntBASIC16.89■□□□□ 0.29
SHDQ96IW2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHDQ96IW2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.89■□□□□ 0.29
SHDQ96IW2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHDQ96IW2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.89■□□□□ 0.29
SHDQ96IW2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.89■□□□□ 0.29
SHDQ96IW2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.89■□□□□ 0.29
SHDQ96IW2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SHDQ96IW2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.89■□□□□ 0.29
SHDQ96IW2 AC132938.2-201ENST00000579188 680 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms