Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AC073347.1-201ENST00000421633 2643 ntBASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AP000523.1-201ENST00000398242 1049 ntBASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AC133561.5-201ENST00000635547 218 ntBASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AC092865.7-201ENST00000641832 219 ntBASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP6Q96FZ7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 AC010491.1-201ENST00000563101 2797 ntBASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP6Q96FZ7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 AC007326.2-201ENST00000624224 7579 ntBASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.04■□□□□ 0.32
CHMP6Q96FZ7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms