Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 AC021087.4-201ENST00000563761 564 ntBASIC17.86■□□□□ 0.45
TRIM11Q96F44 AC091167.2-201ENST00000579581 588 ntBASIC17.86■□□□□ 0.45
TRIM11Q96F44 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 AC107918.4-202ENST00000641623 219 ntBASIC17.86■□□□□ 0.45
TRIM11Q96F44 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 PI4KAP1-204ENST00000612579 1703 ntBASIC17.86■□□□□ 0.45
TRIM11Q96F44 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM11Q96F44 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM11Q96F44 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 ELK2BP-201ENST00000415014 1224 ntBASIC17.85■□□□□ 0.45
TRIM11Q96F44 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM11Q96F44 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 AC002310.6-201ENST00000624451 1377 ntBASIC17.85■□□□□ 0.45
TRIM11Q96F44 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM11Q96F44 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms