Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 U1.21-201ENST00000580816 167 ntBASIC18.26■□□□□ 0.51
PGBD4Q96DM1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 FRMD8P1-201ENST00000440433 1524 ntBASIC18.26■□□□□ 0.51
PGBD4Q96DM1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 AC131009.4-201ENST00000624048 1740 ntBASIC18.26■□□□□ 0.51
PGBD4Q96DM1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 WASH6P-202ENST00000359512 1437 ntBASIC18.25■□□□□ 0.51
PGBD4Q96DM1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 KRT18P32-201ENST00000424695 1287 ntBASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 KRT8P23-201ENST00000560090 1207 ntBASIC18.25■□□□□ 0.51
PGBD4Q96DM1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD4Q96DM1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 SPCS2P4-201ENST00000436160 681 ntBASIC18.24■□□□□ 0.51
PGBD4Q96DM1 FAM86GP-201ENST00000448322 971 ntBASIC18.24■□□□□ 0.51
PGBD4Q96DM1 AC069335.1-201ENST00000489972 472 ntBASIC18.24■□□□□ 0.51
PGBD4Q96DM1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD4Q96DM1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD4Q96DM1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms