Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.88■□□□□ 0.77
BRF1Q92994 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 AC009078.2-202ENST00000463353 338 ntBASIC19.88■□□□□ 0.77
BRF1Q92994 AC092910.1-201ENST00000482027 1129 ntBASIC19.88■□□□□ 0.77
BRF1Q92994 AC107918.2-201ENST00000530817 355 ntBASIC19.88■□□□□ 0.77
BRF1Q92994 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.88■□□□□ 0.77
BRF1Q92994 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.88■□□□□ 0.77
BRF1Q92994 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
BRF1Q92994 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.88■□□□□ 0.77
BRF1Q92994 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF1Q92994 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
BRF1Q92994 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.88■□□□□ 0.77
BRF1Q92994 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.87■□□□□ 0.77
BRF1Q92994 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BRF1Q92994 OR6D1P-203ENST00000641209 4860 ntBASIC19.87■□□□□ 0.77
BRF1Q92994 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
BRF1Q92994 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
BRF1Q92994 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.87■□□□□ 0.77
BRF1Q92994 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.87■□□□□ 0.77
BRF1Q92994 SLC25A6P4-201ENST00000586535 553 ntBASIC19.87■□□□□ 0.77
BRF1Q92994 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.87■□□□□ 0.77
BRF1Q92994 GGTLC5P-201ENST00000617623 998 ntBASIC19.87■□□□□ 0.77
BRF1Q92994 AC005593.1-201ENST00000624894 515 ntBASIC19.87■□□□□ 0.77
BRF1Q92994 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
BRF1Q92994 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
BRF1Q92994 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.87■□□□□ 0.77
BRF1Q92994 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF1Q92994 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
BRF1Q92994 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
BRF1Q92994 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
BRF1Q92994 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.86■□□□□ 0.77
BRF1Q92994 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
BRF1Q92994 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
BRF1Q92994 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.86■□□□□ 0.77
BRF1Q92994 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
BRF1Q92994 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
BRF1Q92994 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.86■□□□□ 0.77
BRF1Q92994 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.86■□□□□ 0.77
BRF1Q92994 AC013467.2-201ENST00000605472 835 ntBASIC19.86■□□□□ 0.77
BRF1Q92994 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
BRF1Q92994 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
BRF1Q92994 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
BRF1Q92994 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.86■□□□□ 0.77
BRF1Q92994 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF1Q92994 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.86■□□□□ 0.77
BRF1Q92994 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF1Q92994 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF1Q92994 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
BRF1Q92994 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.85■□□□□ 0.77
BRF1Q92994 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.85■□□□□ 0.77
BRF1Q92994 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.85■□□□□ 0.77
BRF1Q92994 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.85■□□□□ 0.77
BRF1Q92994 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF1Q92994 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF1Q92994 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.85■□□□□ 0.77
BRF1Q92994 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BRF1Q92994 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF1Q92994 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF1Q92994 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRF1Q92994 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.85■□□□□ 0.77
BRF1Q92994 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
BRF1Q92994 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.85■□□□□ 0.77
BRF1Q92994 TPM4P1-201ENST00000436100 807 ntBASIC19.85■□□□□ 0.77
BRF1Q92994 AC108073.2-201ENST00000464002 357 ntBASIC19.85■□□□□ 0.77
BRF1Q92994 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.85■□□□□ 0.77
BRF1Q92994 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.85■□□□□ 0.77
BRF1Q92994 MPDU1-223ENST00000582151 728 ntBASIC19.85■□□□□ 0.77
BRF1Q92994 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.85■□□□□ 0.77
BRF1Q92994 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
BRF1Q92994 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.85■□□□□ 0.77
BRF1Q92994 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.85■□□□□ 0.77
BRF1Q92994 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms