Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 AL662844.4-201ENST00000606367 2838 ntBASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 TSPY19P-201ENST00000418461 509 ntBASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 TSPY18P-201ENST00000441642 509 ntBASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 MINOS1P3-201ENST00000457048 203 ntBASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 AC068472.1-201ENST00000474589 881 ntBASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 AC099336.1-202ENST00000602961 463 ntBASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 AL353801.3-201ENST00000609898 542 ntBASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40AQ8WXH6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 NSUN5P1-202ENST00000421140 1535 ntBASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 NSUN5P2-203ENST00000457352 1529 ntBASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AC096633.1-201ENST00000422446 749 ntBASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 EGFEM1P-202ENST00000431685 1563 ntBASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40AQ8WXH6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40AQ8WXH6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40AQ8WXH6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40AQ8WXH6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms