Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 AC007967.3-201ENST00000434308 558 ntBASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM4Q8WVI0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 IGHGP-201ENST00000390555 1178 ntBASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 AL390955.1-201ENST00000428694 934 ntBASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 EGLN1P1-201ENST00000531623 762 ntBASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 DUX4L17-201ENST00000557360 1267 ntBASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 AC233702.5-201ENST00000584107 538 ntBASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 AP000525.1-201ENST00000608286 694 ntBASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 AL139011.1-202ENST00000642063 584 ntBASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM4Q8WVI0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.46□□□□□ -0.1
SMIM4Q8WVI0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SMIM4Q8WVI0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SMIM4Q8WVI0 AL353692.3-201ENST00000407031 1396 ntBASIC14.46□□□□□ -0.1
SMIM4Q8WVI0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM4Q8WVI0 GGT3P-204ENST00000453783 1664 ntBASIC14.46□□□□□ -0.1
SMIM4Q8WVI0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.46□□□□□ -0.1
SMIM4Q8WVI0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM4Q8WVI0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms