Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 AC092068.3-201ENST00000587894 2016 ntBASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A9Q8NBW4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 WASH6P-202ENST00000359512 1437 ntBASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 AC108860.2-201ENST00000562760 2183 ntBASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 PMS2P4-201ENST00000412466 1052 ntBASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 KRT18P32-201ENST00000424695 1287 ntBASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 CYP2A7P1-201ENST00000595391 815 ntBASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC38A9Q8NBW4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 PKD1P1-201ENST00000458669 6805 ntBASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 MIR3909-201ENST00000579518 119 ntBASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 Z92544.3-201ENST00000624747 417 ntBASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 AP001350.2-201ENST00000625104 1094 ntBASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A9Q8NBW4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms