Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MIR3909-201ENST00000579518 119 ntBASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRAM1L1Q8N609 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAM1L1Q8N609 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRAM1L1Q8N609 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 AC020916.1-201ENST00000587762 1774 ntBASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 RNU1-129P-201ENST00000384064 167 ntBASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 AP002472.1-201ENST00000577490 586 ntBASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 U1.21-201ENST00000580816 167 ntBASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 AL031055.1-201ENST00000606362 631 ntBASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 AC022211.2-201ENST00000585075 2527 ntBASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAM1L1Q8N609 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 AC109635.5-201ENST00000533593 962 ntBASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 AC092865.5-201ENST00000545435 363 ntBASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 C20orf181-201ENST00000623918 480 ntBASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 SNX33P1-201ENST00000592116 1762 ntBASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAM1L1Q8N609 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms