Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 MED15P5-201ENST00000423150 992 ntBASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 KRT18P3-201ENST00000451602 1288 ntBASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 AC018845.2-201ENST00000568326 409 ntBASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AL591424.1-201ENST00000442569 1213 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AL513480.1-201ENST00000451731 511 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC096734.2-201ENST00000562054 433 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC005412.3-201ENST00000580309 715 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 FAM197Y3-203ENST00000618346 717 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC010507.1-201ENST00000633895 436 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC131009.4-201ENST00000624048 1740 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AL353732.1-201ENST00000569618 1459 ntBASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCUBE3Q8IX30 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCUBE3Q8IX30 AC006277.1-201ENST00000624348 1610 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms