Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.83■□□□□ 0.29
APLFQ8IW19 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
APLFQ8IW19 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.83■□□□□ 0.29
APLFQ8IW19 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
APLFQ8IW19 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
APLFQ8IW19 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.83■□□□□ 0.28
APLFQ8IW19 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.83■□□□□ 0.28
APLFQ8IW19 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.83■□□□□ 0.28
APLFQ8IW19 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.83■□□□□ 0.28
APLFQ8IW19 SLC25A1P1-201ENST00000528351 927 ntBASIC16.83■□□□□ 0.28
APLFQ8IW19 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 AC126177.1-201ENST00000547829 2218 ntBASIC16.83■□□□□ 0.28
APLFQ8IW19 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.83■□□□□ 0.28
APLFQ8IW19 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.83■□□□□ 0.28
APLFQ8IW19 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
APLFQ8IW19 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.83■□□□□ 0.28
APLFQ8IW19 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
APLFQ8IW19 AC148477.8-201ENST00000624298 468 ntBASIC16.83■□□□□ 0.28
APLFQ8IW19 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.83■□□□□ 0.28
APLFQ8IW19 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
APLFQ8IW19 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
APLFQ8IW19 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APLFQ8IW19 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 GMCL1P1-201ENST00000463439 1581 ntBASIC16.82■□□□□ 0.28
APLFQ8IW19 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.82■□□□□ 0.28
APLFQ8IW19 SCARNA2-201ENST00000458748 420 ntBASIC16.82■□□□□ 0.28
APLFQ8IW19 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.82■□□□□ 0.28
APLFQ8IW19 AC073648.2-201ENST00000510116 352 ntBASIC16.82■□□□□ 0.28
APLFQ8IW19 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.82■□□□□ 0.28
APLFQ8IW19 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.82■□□□□ 0.28
APLFQ8IW19 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 AL355312.1-201ENST00000407115 2176 ntBASIC16.82■□□□□ 0.28
APLFQ8IW19 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APLFQ8IW19 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.82■□□□□ 0.28
APLFQ8IW19 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.82■□□□□ 0.28
APLFQ8IW19 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
APLFQ8IW19 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 AC009102.3-201ENST00000623118 1491 ntBASIC16.81■□□□□ 0.28
APLFQ8IW19 TP73-AS1-210ENST00000637775 1455 ntBASIC16.81■□□□□ 0.28
APLFQ8IW19 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms