Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 RBM17P3-201ENST00000417687 1192 ntBASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 DUX4L17-201ENST00000557360 1267 ntBASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 AC091304.2-201ENST00000564639 760 ntBASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 AL139288.1-201ENST00000623748 933 ntBASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 AL391256.1-201ENST00000443260 1855 ntBASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00346Q8IVM7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 HLA-A-202ENST00000376806 1854 ntBASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 AP002414.1-201ENST00000391405 1147 ntBASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 PRYP5-201ENST00000451909 266 ntBASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 SART3-203ENST00000546611 1184 ntBASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 AC008608.2-201ENST00000606089 416 ntBASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 AC012313.10-201ENST00000623509 926 ntBASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 AL021920.2-201ENST00000624828 1351 ntBASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00346Q8IVM7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00346Q8IVM7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms