Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 PCED1CP-201ENST00000419887 785 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 DRAXINP1-201ENST00000437611 948 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 LINC00265-3P-201ENST00000447588 903 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 TOB2P1-201ENST00000469761 992 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 AD001527.2-201ENST00000622994 785 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 AC116407.4-201ENST00000623319 1061 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 GPR89P-201ENST00000407924 1495 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 AC124067.4-201ENST00000519691 2379 ntBASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 KRT17P6-201ENST00000453795 1220 ntBASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 AC132938.5-201ENST00000624980 1813 ntBASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
MRPL55Q7Z7F7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms