Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 SLC25A1P3-201ENST00000395415 828 ntBASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 AC027307.2-201ENST00000591252 911 ntBASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC149Q6ZUS6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 AC116353.5-201ENST00000638148 1699 ntBASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 AC021097.1-201ENST00000607902 574 ntBASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 FRMD8P1-201ENST00000440433 1524 ntBASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC149Q6ZUS6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 AP000842.3-202ENST00000569238 1080 ntBASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 AC027307.3-201ENST00000594262 1100 ntBASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC149Q6ZUS6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms