Protein–RNA interactions for Protein: Q6VB84

FOXD4L3, Forkhead box protein D4-like 3, humanhuman

Predicted RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L3Q6VB84 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 NTF6B-201ENST00000591913 560 ntBASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 AC148477.5-201ENST00000625164 1645 ntBASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXD4L3Q6VB84 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 TMPOP1-202ENST00000424642 1267 ntBASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXD4L3Q6VB84 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 TP73-AS1-210ENST00000637775 1455 ntBASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 AL136038.3-201ENST00000561909 1096 ntBASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 AC016734.2-201ENST00000624325 1377 ntBASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXD4L3Q6VB84 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD4L3Q6VB84 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD4L3Q6VB84 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXD4L3Q6VB84 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD4L3Q6VB84 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXD4L3Q6VB84 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXD4L3Q6VB84 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD4L3Q6VB84 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms