Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC107918.2-201ENST00000530817 355 ntBASIC17.52■□□□□ 0.4
LRRC38Q5VT99 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 IFNL4P1-201ENST00000607083 540 ntBASIC17.52■□□□□ 0.4
LRRC38Q5VT99 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC38Q5VT99 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 OR6D1P-203ENST00000641209 4860 ntBASIC17.52■□□□□ 0.39
LRRC38Q5VT99 AC018695.7-201ENST00000624587 2492 ntBASIC17.52■□□□□ 0.39
LRRC38Q5VT99 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC38Q5VT99 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 AL391005.1-201ENST00000623953 2435 ntBASIC17.51■□□□□ 0.39
LRRC38Q5VT99 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 AL353732.1-201ENST00000569618 1459 ntBASIC17.51■□□□□ 0.39
LRRC38Q5VT99 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SLC22A20-204ENST00000530038 1673 ntBASIC17.51■□□□□ 0.39
LRRC38Q5VT99 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRC38Q5VT99 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 AL513523.2-202ENST00000427283 2040 ntBASIC17.5■□□□□ 0.39
LRRC38Q5VT99 AC129492.6-201ENST00000611383 1305 ntBASIC17.5■□□□□ 0.39
LRRC38Q5VT99 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 AC136632.2-201ENST00000512891 861 ntBASIC17.5■□□□□ 0.39
LRRC38Q5VT99 OR7E14P-202ENST00000530490 1290 ntBASIC17.5■□□□□ 0.39
LRRC38Q5VT99 AC008667.4-201ENST00000607370 168 ntBASIC17.5■□□□□ 0.39
LRRC38Q5VT99 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LRRC38Q5VT99 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms